Publications

Featured Publications

TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes

T-Scan: A Genome-wide Method for the Systematic Discovery of T Cell Epitopes

High-throughput discovery of MHC class I- and II-restricted T cell epitopes using synthetic cellular circuits

TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes

T-Scan: A Genome-wide Method for the Systematic Discovery of T Cell Epitopes

High-throughput discovery of MHC class I- and II-restricted T cell epitopes using synthetic cellular circuits

GZMK+ CD8+ T Cells Target a Specific Acinar Cell Type in Sjögren’s Disease

Thomas J. F. Pranzatelli, Paola Perez, Anson Ku, Bruno Matuck, Khoa Huynh, Shunsuke Sakai, Mehdi Abed, Shyh-Ing Jang, Eiko Yamada, Kalie Dominick, Zara Ahmed, Amanda Oliver, Rachael Wasikowski, Quinn T. Easter, Alan N. Baer, Eileen Pelayo, Zohreh Khavandgar, David E. Kleiner, M. Teresa Magone, Sarthak Gupta, Christopher Lessard, A. Darise Farris, Peter D. Burbelo, Daniel Martin, Robert J. Morell, Changyu Zheng, Nicholas Rachmaninoff, Jose Maldonado-Ortiz, Xufeng Qu, Marit Aure, Mohammad Haj Dezfulian, Ross Lake, Sarah Teichmann, Daniel L. Barber, Lam C. Tsoi, Adam G. Sowalsky, Katarzyna M. Tyc, Jinze Liu, Johann Gudjonsson, Kevin M. Byrd, Philip L. F. Johnson, John A. Chiorini, Blake M. Warner, Research Square (2024)

TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes

Mohammad Haj Dezfulian, Tomasz Kula, Thomas Pranzatelli, Nolan Kamitaki, Qingda Meng, Bhuwan Khatri, Paola Perez, Qikai Xu, Aiquan Chang, Ayano C Kohlgruber, Yumei Leng, Ananth Aditya Jupudi, Michelle L Joachims, John A Chiorini, Christopher J Lessard, A Darise Farris, Senthil K Muthuswamy, Blake M Warner, Stephen J Elledge Cell (2023)

* Featured in Nature Methods, Cell Reports Methods & Cancer Immunotherapy Research

Publications

Featured Publications

TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes

T-Scan: A Genome-wide Method for the Systematic Discovery of T Cell Epitopes

High-throughput discovery of MHC class I- and II-restricted T cell epitopes using synthetic cellular circuits

TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes

T-Scan: A Genome-wide Method for the Systematic Discovery of T Cell Epitopes

High-throughput discovery of MHC class I- and II-restricted T cell epitopes using synthetic cellular circuits

Publications

Human memory CD4+ T-cells recognize Mycobacterium tuberculosis-infected macrophages amid broader pathogen-specific responses

GZMK+ CD8+ T Cells Target a Specific Acinar Cell Type in Sjögren’s Disease

High-throughput discovery of MHC class I-and II-restricted T cell epitopes using synthetic cellular circuits

TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes

Empirical identification and validation of tumor-targeting T cell receptors from circulation using autologous pancreatic tumor organoids

Integrated loss-and gain-of-function screens define a core network governing human embryonic stem cell behavior

T-Scan: a genome-wide method for the systematic discovery of T cell epitopes

Acetolactate synthase regulatory subunits play divergent and overlapping roles in branched-chain amino acid synthesis and Arabidopsis development

Oligomerization of SCFTIR1 Is Essential for Aux/IAA Degradation and Auxin Signaling in Arabidopsis

In silico analyses of Wilms׳ tumor protein to designing a novel multi-epitope DNA vaccine against cancer

The SKP1-like gene family of Arabidopsis exhibits a high degree of differential gene expression and gene product interaction during development

Cheminformatics in anti-infective agents discovery

Patents

Methods and compositions for identifying epitopes

Haj-Dezfulian Lab